Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein n-acetyltransferase, rimj/riml family | SAMN05518853_10158 | Not Available | Negative | 88663 - 89217 | 20809.9 |
| dna-binding transcriptional regulator, marr family | SAMN05518853_10159 | Not Available | Positive | 89313 - 89738 | 16092.5 |
| h+/cl-antiporter clca | SAMN05518853_10160 | Not Available | Positive | 89735 - 91510 | 62386.5 |
| zinc-binding alcohol dehydrogenase family protein | SAMN05518853_10161 | Not Available | Negative | 91529 - 92539 | 35533.1 |
| dna-binding transcriptional regulator, lysr family | SAMN05518853_10162 | Not Available | Positive | 92648 - 93556 | 33341.0 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05518853_10163 | Not Available | Negative | 94028 - 94825 | 27194.1 |
| poly-beta-1,6-n-acetyl-d-glucosamine biosynthesis protein pgad | SAMN05518853_10164 | Not Available | Negative | 94934 - 95515 | 21857.2 |
| biofilm pga synthesis n-glycosyltransferase pgac | SAMN05518853_10165 | Not Available | Negative | 95505 - 96782 | 48720.9 |
| biofilm pga synthesis lipoprotein pgab | SAMN05518853_10166 | Not Available | Negative | 96779 - 98926 | 78696.6 |
| biofilm pga synthesis protein pgaa | SAMN05518853_10167 | Not Available | Negative | 98926 - 101499 | 92548.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
