Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05518853_101862 | Not Available | Positive | 960850 - 961332 | 17273.7 |
| rna polymerase, sigma-24 subunit, rpoe | SAMN05518853_101863 | Not Available | Positive | 961343 - 962017 | 25151.8 |
| sigma-e factor negative regulatory protein rsea | SAMN05518853_101864 | Not Available | Positive | 962035 - 962712 | 23339.8 |
| sigma e regulatory protein, mucb/rseb | SAMN05518853_101865 | Not Available | Positive | 962738 - 963826 | 39824.2 |
| serine protease do | SAMN05518853_101866 | Not Available | Positive | 963928 - 965412 | 52501.8 |
| gtp-binding protein lepa | SAMN05518853_101867 | Not Available | Positive | 965935 - 967746 | 66407.4 |
| signal peptidase i serine peptidase. merops family s26a | SAMN05518853_101868 | Not Available | Positive | 967755 - 968720 | 35710.3 |
| protein of unknown function | SAMN05518853_101869 | Not Available | Positive | 968755 - 969123 | 13324.2 |
| rnase iii | SAMN05518853_101870 | Not Available | Positive | 969141 - 969827 | 24707.9 |
| gtp-binding protein era | SAMN05518853_101871 | Not Available | Positive | 969835 - 970800 | 35594.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
