Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrin-3 c-methyltransferase | SAMN05518853_101842 | Not Available | Positive | 939698 - 940792 | 39101.1 |
| hemy protein | SAMN05518853_101843 | Not Available | Positive | 940799 - 942082 | 46891.8 |
| drug resistance transporter, emrb/qaca subfamily | SAMN05518853_101844 | Not Available | Negative | 942123 - 943691 | 54142.2 |
| dna-binding transcriptional regulator, lysr family | SAMN05518853_101845 | Not Available | Positive | 943821 - 944693 | 31815.7 |
| rnase e | SAMN05518853_101846 | Not Available | Negative | 944740 - 948015 | 119360.0 |
| 23s rrna pseudouridine955/2504/2580 synthase | SAMN05518853_101847 | Not Available | Positive | 948566 - 949678 | 39744.1 |
| phosphoglycolate phosphatase | SAMN05518853_101848 | Not Available | Positive | 949671 - 950342 | 24540.1 |
| ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase | SAMN05518853_101849 | Not Available | Positive | 950361 - 950729 | 13421.9 |
| protease-4 | SAMN05518853_101850 | Not Available | Positive | 950731 - 951747 | 36846.2 |
| fucose permease | SAMN05518853_101851 | Not Available | Negative | 951752 - 952903 | 38484.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
