Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05518853_101812 | Not Available | Positive | 907010 - 908152 | 42507.9 |
| lysophospholipase l1 | SAMN05518853_101813 | Not Available | Negative | 908186 - 908968 | 28348.8 |
| anti-sigma-k factor rska | SAMN05518853_101814 | Not Available | Negative | 909079 - 909840 | 26707.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05518853_101815 | Not Available | Negative | 909875 - 910468 | 22507.1 |
| hypothetical protein | SAMN05518853_101816 | Not Available | Positive | 910620 - 911159 | 20170.4 |
| hypothetical protein | SAMN05518853_101817 | Not Available | Positive | 911206 - 912516 | 48206.8 |
| outer membrane protein, multidrug efflux system | SAMN05518853_101818 | Not Available | Negative | 912542 - 913987 | 50532.6 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN05518853_101819 | Not Available | Negative | 913987 - 917157 | 113088.0 |
| membrane fusion protein, multidrug efflux system | SAMN05518853_101820 | Not Available | Negative | 917167 - 918417 | 43362.8 |
| rhomboid family protein | SAMN05518853_101821 | Not Available | Negative | 918599 - 920074 | 54859.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
