Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system atp-binding protein | SAMN05518853_101782 | Not Available | Positive | 875390 - 877018 | 58313.3 |
| microcystin degradation protein mlrc, contains duf1485 domain | SAMN05518853_101783 | Not Available | Positive | 877061 - 878563 | 52353.4 |
| hippurate hydrolase | SAMN05518853_101784 | Not Available | Positive | 878602 - 879786 | 42570.9 |
| mfs transporter, cp family, cyanate transporter | SAMN05518853_101785 | Not Available | Negative | 879811 - 881052 | 42333.1 |
| dna-binding transcriptional regulator, fadr family | SAMN05518853_101786 | Not Available | Negative | 881094 - 881783 | 24462.4 |
| dna-binding transcriptional regulator, lysr family | SAMN05518853_101787 | Not Available | Positive | 882139 - 883032 | 32548.5 |
| uncharacterized protein | SAMN05518853_101788 | Not Available | Negative | 883055 - 884515 | 50471.4 |
| penicillin-binding protein 1c | SAMN05518853_101789 | Not Available | Negative | 884545 - 886848 | 82868.4 |
| hypothetical protein | SAMN05518853_101790 | Not Available | Positive | 887117 - 887323 | 7685.94 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05518853_101791 | Not Available | Negative | 887392 - 888018 | 21995.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
