Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter family receptor | SAMN05518853_1555 | Not Available | Negative | 8771363 - 8771575 | 7099.62 |
| dna-binding transcriptional regulator, lysr family | SAMN05518853_1561 | Not Available | Positive | 8771576 - 8772507 | 33388.2 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN05518853_1562 | Not Available | Positive | 8772587 - 8774611 | 71428.0 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05518853_1563 | Not Available | Positive | 8774666 - 8775537 | 29511.1 |
| transposase | SAMN05518853_1571 | Not Available | Negative | 8775538 - 8776283 | 27882.6 |
| transposase dde domain-containing protein | SAMN05518853_1572 | Not Available | Negative | 8776397 - 8776648 | 9542.13 |
| hypothetical protein | SAMN05518853_1573 | Not Available | Negative | 8776715 - 8777233 | 19370.3 |
| transposase is66 family protein | SAMN05518853_1574 | Not Available | Negative | 8777285 - 8777653 | 13437.2 |
| transposase | SAMN05518853_1575 | Not Available | Negative | 8777659 - 8778849 | 43735.5 |
| transposase | SAMN05518853_1576 | Not Available | Negative | 8778926 - 8779273 | 12663.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
