Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione-independent formaldehyde dehydrogenase | SAMN05518853_1433 | Not Available | Positive | 8654305 - 8655477 | 41622.0 |
| protein of unknown function | SAMN05518853_1434 | Not Available | Positive | 8655508 - 8655723 | 7570.66 |
| haloacetate dehalogenase | SAMN05518853_1435 | Not Available | Positive | 8655752 - 8656609 | 31542.3 |
| nicotinamidase-related amidase | SAMN05518853_1436 | Not Available | Positive | 8656613 - 8657278 | 23782.9 |
| nad+ synthase (glutamine-hydrolysing) | SAMN05518853_1437 | Not Available | Positive | 8657265 - 8659406 | 77573.8 |
| hypothetical protein | SAMN05518853_1438 | Not Available | Positive | 8659454 - 8660326 | 30668.7 |
| hypothetical protein | SAMN05518853_1439 | Not Available | Positive | 8660337 - 8660741 | 14663.7 |
| uncharacterized membrane protein ycap, duf421 family | SAMN05518853_14310 | Not Available | Negative | 8661623 - 8662165 | 20219.7 |
| glycosyl transferase family 2 | SAMN05518853_14311 | Not Available | Negative | 8662194 - 8662904 | 24526.1 |
| protein of unknown function | SAMN05518853_14312 | Not Available | Negative | 8662961 - 8663305 | 12044.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
