Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/homoserine/homoserine lactone efflux protein | SAMN05518853_14024 | Not Available | Negative | 8613062 - 8613865 | 28406.2 |
| hypothetical protein | SAMN05518853_14025 | Not Available | Positive | 8614033 - 8614123 | 3484.25 |
| hypothetical protein | SAMN05518853_1411 | Not Available | Positive | 8614126 - 8614329 | 7327.18 |
| hypothetical protein | SAMN05518853_1412 | Not Available | Negative | 8614455 - 8615420 | 35058.8 |
| translation elongation factor 2 (ef-2/ef-g) | SAMN05518853_1413 | Not Available | Negative | 8615604 - 8617664 | 73396.8 |
| hypothetical protein | SAMN05518853_1414 | Not Available | Positive | 8617994 - 8618227 | 8289.1 |
| gaf domain-containing protein | SAMN05518853_1415 | Not Available | Positive | 8618332 - 8618805 | 17175.4 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN05518853_1416 | Not Available | Negative | 8618831 - 8619277 | 16159.4 |
| pas domain s-box-containing protein | SAMN05518853_1417 | Not Available | Negative | 8619412 - 8623818 | 158134.0 |
| putative two-component system response regulator | SAMN05518853_1418 | Not Available | Negative | 8623824 - 8624984 | 42816.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
