Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-methylcitrate dehydratase prpd | SAMN05518853_14014 | Not Available | Negative | 8600749 - 8602083 | 46434.5 |
| acyl-coa dehydrogenase | SAMN05518853_14015 | Not Available | Negative | 8602115 - 8603275 | 42709.5 |
| coa:oxalate coa-transferase | SAMN05518853_14016 | Not Available | Negative | 8603297 - 8604499 | 42490.1 |
| dna-binding transcriptional regulator, gntr family | SAMN05518853_14017 | Not Available | Negative | 8604496 - 8605275 | 28351.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05518853_14018 | Not Available | Positive | 8605488 - 8606513 | 36106.8 |
| helix-turn-helix domain-containing protein | SAMN05518853_14019 | Not Available | Negative | 8606581 - 8606808 | 8159.98 |
| integrase core domain-containing protein | SAMN05518853_14020 | Not Available | Negative | 8607807 - 8608046 | 9174.69 |
| hth-like domain-containing protein | SAMN05518853_14021 | Not Available | Negative | 8608097 - 8608465 | 14057.2 |
| diguanylate cyclase/phosphodiesterase with pas/pac sensor(s) | SAMN05518853_14022 | Not Available | Positive | 8609048 - 8612275 | 118784.0 |
| protein of unknown function | SAMN05518853_14023 | Not Available | Negative | 8612295 - 8612759 | 16841.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
