Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative peptide zinc metalloprotease protein | SAMN05518853_13722 | Not Available | Negative | 8506066 - 8508168 | 78820.5 |
| multidrug efflux pump subunit acra (membrane-fusion protein) | SAMN05518853_13723 | Not Available | Negative | 8508174 - 8509568 | 50335.6 |
| ig-like domain (group 3) | SAMN05518853_13724 | Not Available | Negative | 8509565 - 8515522 | 197791.0 |
| rnd family efflux transporter, mfp subunit | SAMN05518853_13725 | Not Available | Negative | 8515576 - 8516361 | 27947.8 |
| outer membrane protein tolc | SAMN05518853_13726 | Not Available | Negative | 8516358 - 8517917 | 57256.2 |
| hypothetical protein | SAMN05518853_13727 | Not Available | Positive | 8518809 - 8519450 | 22863.5 |
| hypothetical protein | SAMN05518853_13728 | Not Available | Negative | 8519457 - 8519600 | 5201.22 |
| hypothetical protein | SAMN05518853_13729 | Not Available | Negative | 8520007 - 8520417 | 14957.2 |
| hypothetical protein | SAMN05518853_13730 | Not Available | Negative | 8520534 - 8520710 | 6520.9 |
| transposase, is5 family | SAMN05518853_13731 | Not Available | Negative | 8520806 - 8521312 | 18926.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
