Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05518853_101750 | Not Available | Negative | 842897 - 843928 | 36159.7 |
| dna-binding transcriptional regulator, lysr family | SAMN05518853_101751 | Not Available | Negative | 843925 - 844854 | 33434.9 |
| feruloyl esterase | SAMN05518853_101752 | Not Available | Positive | 844986 - 847646 | 91415.9 |
| hypothetical protein | SAMN05518853_101753 | Not Available | Positive | 847643 - 849004 | 48750.0 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05518853_101754 | Not Available | Positive | 849047 - 850033 | 34350.9 |
| helix-turn-helix domain-containing protein | SAMN05518853_101755 | Not Available | Positive | 850189 - 850632 | 15799.9 |
| ecsc protein family protein | SAMN05518853_101756 | Not Available | Negative | 850767 - 851669 | 32222.8 |
| hypothetical protein | SAMN05518853_101757 | Not Available | Negative | 851760 - 852350 | 21137.4 |
| mfs transporter, mhs family, alpha-ketoglutarate permease | SAMN05518853_101758 | Not Available | Negative | 852427 - 853776 | 48583.8 |
| l-lactate dehydrogenase (cytochrome) | SAMN05518853_101759 | Not Available | Negative | 853886 - 855043 | 42060.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
