Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc transporter | SAMN05518853_13529 | Not Available | Positive | 8412522 - 8413568 | 38585.3 |
| hypothetical protein | SAMN05518853_13530 | Not Available | Positive | 8413705 - 8414523 | 29536.7 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05518853_13531 | Not Available | Positive | 8414520 - 8415497 | 35005.5 |
| trna threonylcarbamoyl adenosine modification protein, sua5/ycio/yrdc/ywlc family | SAMN05518853_13532 | Not Available | Positive | 8415514 - 8416149 | 23288.1 |
| zn-dependent protease (includes spoivfb) | SAMN05518853_13533 | Not Available | Positive | 8416191 - 8416862 | 24558.0 |
| tryptophanyl-trna synthetase | SAMN05518853_13534 | Not Available | Positive | 8416878 - 8418209 | 48458.8 |
| two component transcriptional regulator, luxr family | SAMN05518853_13535 | Not Available | Positive | 8418288 - 8418890 | 21833.4 |
| signal transduction histidine kinase | SAMN05518853_13536 | Not Available | Negative | 8419020 - 8420435 | 52175.6 |
| catechol 2,3-dioxygenase | SAMN05518853_13537 | Not Available | Positive | 8420608 - 8421018 | 14859.8 |
| putative membrane protein | SAMN05518853_13538 | Not Available | Positive | 8421012 - 8421413 | 14335.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
