Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN05518853_1359 | Not Available | Negative | 8388164 - 8391346 | 113323.0 |
| membrane fusion protein, multidrug efflux system | SAMN05518853_13510 | Not Available | Negative | 8391343 - 8392587 | 43516.6 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN05518853_13511 | Not Available | Negative | 8392592 - 8394088 | 51841.0 |
| predicted oxidoreductase | SAMN05518853_13512 | Not Available | Negative | 8394403 - 8395413 | 36869.1 |
| alkaline phosphatase d | SAMN05518853_13513 | Not Available | Negative | 8395514 - 8397061 | 55876.6 |
| 40-residue yvtn family beta-propeller repeat-containing protein | SAMN05518853_13514 | Not Available | Negative | 8397138 - 8398466 | 44945.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05518853_13515 | Not Available | Positive | 8398614 - 8399210 | 22589.6 |
| transmembrane transcriptional regulator (anti-sigma factor rsiw) | SAMN05518853_13516 | Not Available | Positive | 8399197 - 8399868 | 23768.6 |
| mfs transporter, dha1 family, inner membrane transport protein | SAMN05518853_13517 | Not Available | Negative | 8399894 - 8401159 | 42667.9 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05518853_13518 | Not Available | Negative | 8401303 - 8401995 | 25306.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
