Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine carbamoyltransferase | SAMN05518853_13449 | Not Available | Positive | 8377899 - 8378399 | 17427.0 |
| hypothetical protein | SAMN05518853_13450 | Not Available | Positive | 8378913 - 8379091 | 6514.12 |
| autotransporter-associated beta strand repeat-containing protein/t5ss/pep-cterm-associated repeat-containing protein | SAMN05518853_1351 | Not Available | Negative | 8379092 - 8380622 | 48310.6 |
| two component transcriptional regulator, luxr family | SAMN05518853_1352 | Not Available | Negative | 8380986 - 8381618 | 22838.9 |
| two-component system, narl family, sensor kinase | SAMN05518853_1353 | Not Available | Negative | 8381624 - 8383024 | 51677.9 |
| hypothetical protein | SAMN05518853_1354 | Not Available | Positive | 8383084 - 8383515 | 15433.4 |
| predicted arabinose efflux permease, mfs family | SAMN05518853_1355 | Not Available | Negative | 8383548 - 8384798 | 42639.4 |
| membrane protein deda, snare-associated domain | SAMN05518853_1356 | Not Available | Negative | 8384940 - 8385878 | 33079.1 |
| two-component system, ompr family, heavy metal sensor histidine kinase cuss | SAMN05518853_1357 | Not Available | Negative | 8386011 - 8387393 | 50415.3 |
| two-component system, ompr family, copper resistance phosphate regulon response regulator cusr | SAMN05518853_1358 | Not Available | Negative | 8387390 - 8388130 | 27867.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
