Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05518853_101740 | Not Available | Positive | 833384 - 834379 | 34633.1 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN05518853_101741 | Not Available | Positive | 834383 - 835915 | 54017.0 |
| protein of unknown function | SAMN05518853_101742 | Not Available | Positive | 836073 - 836258 | 6783.04 |
| hypothetical protein | SAMN05518853_101743 | Not Available | Positive | 836420 - 837118 | 24583.5 |
| dna topoisomerase-1 | SAMN05518853_101744 | Not Available | Negative | 837061 - 838293 | 45207.2 |
| purine nucleoside permease | SAMN05518853_101745 | Not Available | Positive | 838455 - 839534 | 38726.9 |
| conserved hypothetical protein | SAMN05518853_101746 | Not Available | Negative | 839567 - 840274 | 25787.7 |
| dna polymerase-4 | SAMN05518853_101747 | Not Available | Negative | 840274 - 841518 | 45428.9 |
| permuted papain-like amidase enzyme, yaef/yiix, c92 family | SAMN05518853_101748 | Not Available | Negative | 841591 - 842259 | 24470.5 |
| hypothetical protein | SAMN05518853_101749 | Not Available | Positive | 842303 - 842872 | 21390.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
