Variovorax sp. OK202

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. OK202 is a rod-shaped bacterium characterized by possessing a single replicon. This trait is significant as it indicates a streamlined genomic organization, which can influence its replication and metabolic efficiency. The organism is cataloged in the sequence database with the accession number FNZJ00000000.1, allowing for further study and reference within scientific literature. Variovorax species are generally known for their versatility in various environments, often exhibiting capabilities such as biodegradation and bioremediation. While specific ecological roles of Variovorax sp. OK202 are not detailed here, the genus is often associated with the degradation of pollutants, which suggests that this strain could potentially play a role in bioremediation processes. The unique characteristics of Variovorax sp. OK202, including its rod shape and genomic structure, may confer advantages in adapting to diverse ecological niches. Understanding the traits of this bacterium can provide insights into its potential applications in environmental microbiology, particularly in the context of pollutant degradation and ecosystem management. Further research could elucidate its specific metabolic pathways and interactions within its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. OK202
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. OK202 genome assembly, contig: Ga0115515_170, whole

Gene Summary

Adenine Count

1408811 bp

Thymine Count

1405773 bp

Guanine Count

2995055 bp

Cytosine Count

2992361 bp

Genome Length

8802000 bp

Protein-coding Genes

8015 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methylglutaconyl-coa hydrataseSAMN05518853_13314Not AvailableNegative8264581 - 826538128352.0
dienelactone hydrolaseSAMN05518853_13315Not AvailableNegative8265398 - 826626731335.5
3-methylcrotonyl-coa carboxylase beta subunitSAMN05518853_13316Not AvailableNegative8266288 - 826791357963.6
fatty-acyl-coa synthaseSAMN05518853_13317Not AvailableNegative8267910 - 826958962075.8
isovaleryl-coa dehydrogenaseSAMN05518853_13318Not AvailableNegative8269732 - 827090442435.7
arac-type dna-binding proteinSAMN05518853_13319Not AvailablePositive8271046 - 827207438733.8
vanillate o-demethylase monooxygenase subunitSAMN05518853_13320Not AvailableNegative8272012 - 827312441400.4
regulatory protein, luxr familySAMN05518853_13321Not AvailableNegative8273274 - 827410130596.8
thioredoxin 1SAMN05518853_13322Not AvailableNegative8274214 - 827454612121.4
haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or edSAMN05518853_13323Not AvailableNegative8274600 - 827529224502.4

Displaying genes 7591 – 7600 of 8094 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.