Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05518853_1334 | Not Available | Negative | 8255958 - 8256974 | 35532.3 |
| cupin domain protein | SAMN05518853_1335 | Not Available | Negative | 8257045 - 8257440 | 14485.3 |
| transcriptional regulator, iclr family | SAMN05518853_1336 | Not Available | Negative | 8257437 - 8258186 | 27361.2 |
| glyoxylate/hydroxypyruvate reductase a | SAMN05518853_1337 | Not Available | Negative | 8258286 - 8259206 | 33952.0 |
| conserved hypothetical protein | SAMN05518853_1338 | Not Available | Positive | 8259324 - 8259638 | 11487.0 |
| glutathione s-transferase | SAMN05518853_1339 | Not Available | Negative | 8259654 - 8260274 | 22854.4 |
| protein of unknown function | SAMN05518853_13310 | Not Available | Negative | 8260318 - 8261313 | 35732.2 |
| 3-methylcrotonyl-coa carboxylase alpha subunit | SAMN05518853_13311 | Not Available | Negative | 8261383 - 8263386 | 72273.1 |
| protein of unknown function | SAMN05518853_13312 | Not Available | Negative | 8263379 - 8264053 | 23535.2 |
| cell wall assembly regulator smi1 | SAMN05518853_13313 | Not Available | Negative | 8264063 - 8264575 | 18935.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
