Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat-containing protein | SAMN05518853_13134 | Not Available | Positive | 8146792 - 8147643 | 31220.2 |
| hypothetical protein | SAMN05518853_13135 | Not Available | Positive | 8148112 - 8149101 | 32685.6 |
| sodium/proton antiporter, cpa1 family | SAMN05518853_13136 | Not Available | Positive | 8149235 - 8150533 | 45328.3 |
| hypothetical protein | SAMN05518853_13137 | Not Available | Positive | 8150530 - 8150631 | 3959.87 |
| hypothetical protein | SAMN05518853_13138 | Not Available | Positive | 8150988 - 8151359 | 13602.2 |
| transposase | SAMN05518853_13139 | Not Available | Positive | 8151569 - 8152609 | 37891.3 |
| transposase | SAMN05518853_13140 | Not Available | Negative | 8152668 - 8153816 | 42147.3 |
| polar amino acid transport system substrate-binding protein/arginine/ornithine transport system substrate-binding protein | SAMN05518853_13141 | Not Available | Positive | 8154369 - 8155154 | 28870.8 |
| amino acid abc transporter membrane protein 1, paat family | SAMN05518853_13142 | Not Available | Positive | 8155170 - 8155841 | 23252.5 |
| amino acid abc transporter membrane protein 2, paat family | SAMN05518853_13143 | Not Available | Positive | 8155848 - 8156549 | 25088.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
