Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05518853_13031 | Not Available | Positive | 8067366 - 8067647 | 10199.5 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05518853_13032 | Not Available | Negative | 8067762 - 8068856 | 39338.9 |
| drug resistance transporter, emrb/qaca subfamily | SAMN05518853_13033 | Not Available | Positive | 8069127 - 8070512 | 48533.8 |
| hypothetical protein | SAMN05518853_13034 | Not Available | Negative | 8070535 - 8070690 | 5057.12 |
| uncharacterized membrane protein, oligopeptide transporter (opt) family | SAMN05518853_13035 | Not Available | Negative | 8070706 - 8072274 | 54606.2 |
| hypothetical protein | SAMN05518853_13036 | Not Available | Positive | 8072374 - 8072982 | 21117.7 |
| hypothetical protein | SAMN05518853_13037 | Not Available | Positive | 8073145 - 8073702 | 20607.5 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05518853_13038 | Not Available | Positive | 8074000 - 8076090 | 76193.6 |
| pas domain s-box-containing protein | SAMN05518853_13039 | Not Available | Positive | 8076243 - 8078156 | 70954.7 |
| hypothetical protein | SAMN05518853_13040 | Not Available | Negative | 8078861 - 8079115 | 9449.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
