Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN05518853_101680 | Not Available | Negative | 766265 - 767206 | 33914.1 |
| solute carrier family 10 (sodium/bile acid cotransporter), member 7 | SAMN05518853_101681 | Not Available | Positive | 767268 - 768287 | 35836.4 |
| phosphate:na+ symporter | SAMN05518853_101682 | Not Available | Negative | 768590 - 770251 | 59766.8 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN05518853_101683 | Not Available | Negative | 770316 - 771176 | 31358.3 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN05518853_101684 | Not Available | Negative | 771173 - 772234 | 38389.4 |
| putative spermidine/putrescine transport system permease protein | SAMN05518853_101685 | Not Available | Negative | 772224 - 773048 | 29769.3 |
| putative spermidine/putrescine transport system permease protein | SAMN05518853_101686 | Not Available | Negative | 773064 - 773906 | 29853.8 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN05518853_101687 | Not Available | Negative | 773923 - 774945 | 36737.1 |
| transcriptional regulator, laci family | SAMN05518853_101688 | Not Available | Negative | 774989 - 776008 | 35622.8 |
| signal peptidase ii aspartic peptidase. merops family a08 | SAMN05518853_101689 | Not Available | Negative | 776185 - 776697 | 18730.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
