Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin amidase | SAMN05518853_101630 | Not Available | Negative | 707142 - 709601 | 88805.1 |
| phenylacetate-coa ligase | SAMN05518853_101631 | Not Available | Negative | 709640 - 710950 | 48000.4 |
| acyl-coa thioesterase | SAMN05518853_101632 | Not Available | Negative | 710964 - 711422 | 16376.3 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | SAMN05518853_101633 | Not Available | Negative | 711426 - 712229 | 27532.3 |
| phenylacetic acid degradation protein | SAMN05518853_101634 | Not Available | Positive | 712399 - 713028 | 22205.8 |
| transcriptional regulator, tetr family | SAMN05518853_101635 | Not Available | Positive | 713102 - 713785 | 24705.4 |
| hypothetical protein | SAMN05518853_101636 | Not Available | Negative | 713775 - 714578 | 27282.8 |
| transcriptional regulator, tetr family | SAMN05518853_101637 | Not Available | Positive | 714710 - 715285 | 20617.6 |
| ca-activated chloride channel family protein | SAMN05518853_101638 | Not Available | Negative | 715292 - 716329 | 37211.6 |
| protein of unknown function duf58 | SAMN05518853_101639 | Not Available | Negative | 716326 - 717324 | 37082.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
