Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system permease protein | SAMN05518853_101580 | Not Available | Positive | 656335 - 657174 | 30255.3 |
| peptide/nickel transport system atp-binding protein | SAMN05518853_101581 | Not Available | Positive | 657174 - 658217 | 37486.7 |
| peptide/nickel transport system atp-binding protein | SAMN05518853_101582 | Not Available | Positive | 658360 - 659337 | 35240.6 |
| d-serine dehydratase | SAMN05518853_101583 | Not Available | Positive | 659334 - 660656 | 47448.8 |
| transcriptional regulator, rpir family | SAMN05518853_101584 | Not Available | Positive | 660667 - 661581 | 32203.7 |
| dihydroorotase | SAMN05518853_101585 | Not Available | Positive | 661578 - 663056 | 53033.7 |
| hypothetical protein | SAMN05518853_101586 | Not Available | Positive | 663192 - 663377 | 6900.14 |
| hypothetical protein | SAMN05518853_101587 | Not Available | Positive | 663549 - 663971 | 14054.6 |
| cubico group peptidase, beta-lactamase class c family | SAMN05518853_101588 | Not Available | Positive | 664033 - 665130 | 37688.8 |
| dna-binding transcriptional regulator, lysr family | SAMN05518853_101589 | Not Available | Negative | 665135 - 666076 | 34423.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
