Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exonuclease recj | SAMN05518853_101570 | Not Available | Negative | 645533 - 647260 | 61921.8 |
| hypothetical protein | SAMN05518853_101571 | Not Available | Negative | 647257 - 648222 | 34413.0 |
| lipoprotein-releasing system permease protein | SAMN05518853_101572 | Not Available | Positive | 648278 - 649534 | 45484.0 |
| lipoprotein-releasing system atp-binding protein | SAMN05518853_101573 | Not Available | Positive | 649527 - 650288 | 26685.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05518853_101574 | Not Available | Negative | 650413 - 651186 | 27702.3 |
| atp-dependent clp protease, protease subunit | SAMN05518853_101575 | Not Available | Positive | 651268 - 651888 | 22432.8 |
| reactive intermediate/imine deaminase | SAMN05518853_101576 | Not Available | Negative | 651899 - 652288 | 14082.9 |
| peptide/nickel transport system substrate-binding protein | SAMN05518853_101577 | Not Available | Positive | 652504 - 654093 | 57784.7 |
| 6-phosphogluconolactonase, cycloisomerase 2 family | SAMN05518853_101578 | Not Available | Positive | 654110 - 655378 | 44106.0 |
| peptide/nickel transport system permease protein | SAMN05518853_101579 | Not Available | Positive | 655378 - 656331 | 33702.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
