Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, xre family with cupin sensor | SAMN05518853_10128 | Not Available | Positive | 38207 - 38788 | 20317.3 |
| hypothetical protein | SAMN05518853_10129 | Not Available | Negative | 38821 - 39054 | 8610.43 |
| phage repressor protein. serine peptidase. merops family s24 | SAMN05518853_10130 | Not Available | Positive | 39271 - 39843 | 20462.5 |
| hypothetical protein | SAMN05518853_10131 | Not Available | Positive | 39948 - 40211 | 9697.59 |
| 2-pyrone-4,6-dicarboxylate lactonase | SAMN05518853_10132 | Not Available | Negative | 40252 - 41109 | 30594.7 |
| drug resistance transporter, emrb/qaca subfamily | SAMN05518853_10133 | Not Available | Negative | 41106 - 42536 | 48799.8 |
| ig-like domain (group 3) | SAMN05518853_10134 | Not Available | Positive | 42926 - 56959 | 454798.0 |
| outer membrane protein, adhesin transport system | SAMN05518853_10135 | Not Available | Positive | 56968 - 58395 | 50240.8 |
| atp-binding cassette, subfamily c, lapb | SAMN05518853_10136 | Not Available | Positive | 58392 - 60566 | 79308.9 |
| membrane fusion protein, adhesin transport system | SAMN05518853_10137 | Not Available | Positive | 60553 - 61716 | 42450.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
