Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hisf | SAMN05518853_101540 | Not Available | Positive | 610669 - 611454 | 27288.4 |
| phosphoribosyl-amp cyclohydrolase | SAMN05518853_101541 | Not Available | Positive | 611520 - 611909 | 14835.6 |
| phosphoribosyl-atp pyrophosphatase | SAMN05518853_101542 | Not Available | Positive | 611906 - 612319 | 14634.0 |
| uncharacterized membrane protein | SAMN05518853_101543 | Not Available | Positive | 612333 - 612722 | 14686.3 |
| histidine triad (hit) family protein | SAMN05518853_101544 | Not Available | Positive | 612712 - 613071 | 13203.2 |
| sec-independent protein translocase protein tata | SAMN05518853_101545 | Not Available | Positive | 613137 - 613382 | 8508.25 |
| sec-independent protein translocase protein tatb | SAMN05518853_101546 | Not Available | Positive | 613396 - 613866 | 17319.9 |
| sec-independent protein translocase protein tatc | SAMN05518853_101547 | Not Available | Positive | 613933 - 614742 | 29532.8 |
| serine pepetdase degs | SAMN05518853_101548 | Not Available | Negative | 614943 - 616103 | 40220.2 |
| major facilitator superfamily protein | SAMN05518853_101549 | Not Available | Positive | 616399 - 617832 | 50159.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
