Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | SAMN05518853_101510 | Not Available | Positive | 579794 - 580903 | 38967.2 |
| dgtpase | SAMN05518853_101511 | Not Available | Positive | 580900 - 582030 | 42569.2 |
| cyanate permease | SAMN05518853_101512 | Not Available | Positive | 582027 - 583292 | 42745.2 |
| hypothetical protein | SAMN05518853_101513 | Not Available | Positive | 583289 - 583864 | 20550.2 |
| methyltransferase domain-containing protein | SAMN05518853_101514 | Not Available | Positive | 583861 - 584751 | 32905.8 |
| putative transposase | SAMN05518853_101515 | Not Available | Positive | 584799 - 585494 | 26095.1 |
| glutamate synthase (nadh) large subunit | SAMN05518853_101516 | Not Available | Positive | 585681 - 590429 | 172666.0 |
| glutamate synthase (nadh) small subunit | SAMN05518853_101517 | Not Available | Positive | 590464 - 591942 | 53642.0 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN05518853_101518 | Not Available | Positive | 592001 - 592873 | 31270.8 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN05518853_101519 | Not Available | Positive | 592956 - 593738 | 27823.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
