Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, ompr family, sensor histidine kinase tcte | SAMN05518853_101490 | Not Available | Positive | 556870 - 558300 | 52240.0 |
| methionine adenosyltransferase | SAMN05518853_101491 | Not Available | Negative | 558304 - 559485 | 43053.0 |
| kdo2-lipid iv(a) lauroyltransferase | SAMN05518853_101492 | Not Available | Positive | 559705 - 560595 | 32355.4 |
| kdo2-lipid iv(a) lauroyltransferase | SAMN05518853_101493 | Not Available | Positive | 560592 - 561476 | 32812.8 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05518853_101494 | Not Available | Negative | 561516 - 562430 | 33644.4 |
| gtp-binding protein | SAMN05518853_101495 | Not Available | Negative | 562516 - 563286 | 27791.6 |
| cytochrome c553 | SAMN05518853_101496 | Not Available | Positive | 563366 - 564046 | 23770.2 |
| cytochrome c biogenesis protein | SAMN05518853_101497 | Not Available | Positive | 564178 - 566358 | 79086.4 |
| cytochrome c-type biogenesis protein ccsb | SAMN05518853_101498 | Not Available | Positive | 566370 - 567686 | 49247.4 |
| sulfoxide reductase catalytic subunit yedy | SAMN05518853_101499 | Not Available | Positive | 567803 - 568822 | 37813.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
