Variovorax sp. OK202

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. OK202 is a rod-shaped bacterium characterized by possessing a single replicon. This trait is significant as it indicates a streamlined genomic organization, which can influence its replication and metabolic efficiency. The organism is cataloged in the sequence database with the accession number FNZJ00000000.1, allowing for further study and reference within scientific literature. Variovorax species are generally known for their versatility in various environments, often exhibiting capabilities such as biodegradation and bioremediation. While specific ecological roles of Variovorax sp. OK202 are not detailed here, the genus is often associated with the degradation of pollutants, which suggests that this strain could potentially play a role in bioremediation processes. The unique characteristics of Variovorax sp. OK202, including its rod shape and genomic structure, may confer advantages in adapting to diverse ecological niches. Understanding the traits of this bacterium can provide insights into its potential applications in environmental microbiology, particularly in the context of pollutant degradation and ecosystem management. Further research could elucidate its specific metabolic pathways and interactions within its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. OK202
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. OK202 genome assembly, contig: Ga0115515_170, whole

Gene Summary

Adenine Count

1408811 bp

Thymine Count

1405773 bp

Guanine Count

2995055 bp

Cytosine Count

2992361 bp

Genome Length

8802000 bp

Protein-coding Genes

8015 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glucose-6-phosphate isomeraseSAMN05518853_101460Not AvailablePositive523010 - 52456956475.1
4-hydroxythreonine-4-phosphate dehydrogenaseSAMN05518853_101461Not AvailableNegative524553 - 52564137799.5
tripartite-type tricarboxylate transporter, receptor component tctcSAMN05518853_101462Not AvailableNegative525685 - 52665933613.6
transcriptional regulator, lysr familySAMN05518853_101463Not AvailablePositive526753 - 52769734182.6
sorbitol-binding protein /mannitol-binding proteinSAMN05518853_101464Not AvailablePositive527911 - 52922147601.9
sorbitol abc transporter membrane protein /mannitol abc transporter membrane proteinSAMN05518853_101465Not AvailablePositive529380 - 53023732034.4
sorbitol abc transporter membrane protein /mannitol abc transporter membrane proteinSAMN05518853_101466Not AvailablePositive530251 - 53108730507.8
sorbitol abc transporter atp-binding protein /mannitol abc transporter atp-binding proteinSAMN05518853_101467Not AvailablePositive531105 - 53215137687.6
d-arabinitol 4-dehydrogenaseSAMN05518853_101468Not AvailablePositive532183 - 53361351414.0
d-sorbitol dehydrogenase (acceptor)SAMN05518853_101469Not AvailablePositive533610 - 53439827274.9

Displaying genes 481 – 490 of 8094 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.