Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05518853_101450 | Not Available | Positive | 511796 - 511975 | 7159.83 |
| solute:na+ symporter, sss family | SAMN05518853_101451 | Not Available | Positive | 511972 - 513480 | 53360.4 |
| 4,5-dopa dioxygenase extradiol | SAMN05518853_101452 | Not Available | Positive | 513546 - 514466 | 32341.5 |
| glucose-6-phosphate 1-dehydrogenase | SAMN05518853_101453 | Not Available | Negative | 514498 - 515970 | 54907.3 |
| iron(iii) transport system substrate-binding protein | SAMN05518853_101454 | Not Available | Positive | 516130 - 517143 | 36521.7 |
| iron(iii) transport system permease protein | SAMN05518853_101455 | Not Available | Positive | 517144 - 519414 | 80261.5 |
| iron(iii) transport system atp-binding protein | SAMN05518853_101456 | Not Available | Positive | 519411 - 520478 | 37575.2 |
| putative hydrolase of the had superfamily | SAMN05518853_101457 | Not Available | Positive | 520491 - 521153 | 24563.6 |
| apolipoprotein d and lipocalin family protein | SAMN05518853_101458 | Not Available | Negative | 521099 - 521767 | 24153.9 |
| transaldolase | SAMN05518853_101459 | Not Available | Positive | 522051 - 523007 | 34555.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
