Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| caax protease self-immunity | SAMN05518853_101380 | Not Available | Negative | 430887 - 431534 | 22825.4 |
| 2,4-dienoyl-coa reductase | SAMN05518853_101381 | Not Available | Negative | 431650 - 432807 | 41324.1 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05518853_101382 | Not Available | Negative | 432804 - 433796 | 34515.7 |
| dna-binding transcriptional regulator, lysr family | SAMN05518853_101383 | Not Available | Positive | 433920 - 434825 | 32645.5 |
| high-affinity nickel-transport protein | SAMN05518853_101384 | Not Available | Positive | 434971 - 435789 | 29429.3 |
| udp-n-acetylmuramyl pentapeptide synthase | SAMN05518853_101385 | Not Available | Positive | 435864 - 440696 | 174761.0 |
| hypothetical protein | SAMN05518853_101386 | Not Available | Positive | 440693 - 441634 | 34068.4 |
| aldose 1-epimerase | SAMN05518853_101387 | Not Available | Positive | 441721 - 442800 | 38858.4 |
| arac-type dna-binding protein | SAMN05518853_101388 | Not Available | Negative | 442784 - 443770 | 36468.2 |
| sugar lactone lactonase yvre | SAMN05518853_101389 | Not Available | Negative | 443889 - 444854 | 35035.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
