Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | Positive | 3760 - 5298 | 18.01 |
| dna-directed rna polymerase subunit beta | SAMN05518853_1019 | Not Available | Positive | 4012 - 8136 | 152789.0 |
| dna-directed rna polymerase subunit beta' | SAMN05518853_10110 | Not Available | Positive | 8156 - 12391 | 154883.0 |
| lema protein | SAMN05518853_10111 | Not Available | Positive | 12490 - 13116 | 21985.7 |
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN05518853_10112 | Not Available | Positive | 13077 - 14573 | 53620.9 |
| protein of unknown function | SAMN05518853_10113 | Not Available | Positive | 14599 - 15192 | 22283.7 |
| signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation | SAMN05518853_10114 | Not Available | Positive | 15189 - 17519 | 83329.8 |
| response regulator receiver domain-containing protein | SAMN05518853_10115 | Not Available | Positive | 17609 - 18310 | 25303.4 |
| Trna-phe | Not Available | Not Available | Positive | 18335 - 18407 | Not Available |
| hypothetical protein | SAMN05518853_10117 | Not Available | Positive | 18594 - 18815 | 7956.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
