Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN05518853_101350 | Not Available | Negative | 399431 - 400939 | 55716.2 |
| hypothetical protein | SAMN05518853_101351 | Not Available | Positive | 401049 - 401405 | 12665.3 |
| trehalose 6-phosphate synthase | SAMN05518853_101352 | Not Available | Negative | 401420 - 402805 | 52410.9 |
| glucoamylase (glucan-1,4-alpha-glucosidase), gh15 family | SAMN05518853_101353 | Not Available | Negative | 402802 - 404724 | 71207.6 |
| trehalose 6-phosphatase | SAMN05518853_101354 | Not Available | Negative | 404721 - 405542 | 29041.7 |
| trna nucleotidyltransferase (cca-adding enzyme) | SAMN05518853_101355 | Not Available | Negative | 405827 - 407125 | 47398.2 |
| outer membrane protein | SAMN05518853_101356 | Not Available | Positive | 407291 - 408016 | 25509.5 |
| glutathione s-transferase | SAMN05518853_101357 | Not Available | Negative | 408062 - 408745 | 24997.2 |
| putative mg2+ transporter-c (mgtc) family protein | SAMN05518853_101358 | Not Available | Negative | 408882 - 409448 | 19491.0 |
| soluble lytic murein transglycosylase | SAMN05518853_101359 | Not Available | Negative | 409463 - 411505 | 75055.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
