Variovorax sp. OK202

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. OK202 is a rod-shaped bacterium characterized by possessing a single replicon. This trait is significant as it indicates a streamlined genomic organization, which can influence its replication and metabolic efficiency. The organism is cataloged in the sequence database with the accession number FNZJ00000000.1, allowing for further study and reference within scientific literature. Variovorax species are generally known for their versatility in various environments, often exhibiting capabilities such as biodegradation and bioremediation. While specific ecological roles of Variovorax sp. OK202 are not detailed here, the genus is often associated with the degradation of pollutants, which suggests that this strain could potentially play a role in bioremediation processes. The unique characteristics of Variovorax sp. OK202, including its rod shape and genomic structure, may confer advantages in adapting to diverse ecological niches. Understanding the traits of this bacterium can provide insights into its potential applications in environmental microbiology, particularly in the context of pollutant degradation and ecosystem management. Further research could elucidate its specific metabolic pathways and interactions within its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. OK202
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. OK202 genome assembly, contig: Ga0115515_170, whole

Gene Summary

Adenine Count

1408811 bp

Thymine Count

1405773 bp

Guanine Count

2995055 bp

Cytosine Count

2992361 bp

Genome Length

8802000 bp

Protein-coding Genes

8015 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
predicted branched-chain amino acid permease (azaleucine resistance)SAMN05518853_101330Not AvailableNegative382450 - 38313324185.8
2og-fe(ii) oxygenase superfamily proteinSAMN05518853_101331Not AvailableNegative383167 - 38391328425.1
camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinasesSAMN05518853_101332Not AvailableNegative383987 - 38473327077.3
probable phosphoglycerate mutaseSAMN05518853_101333Not AvailableNegative384798 - 38544223441.6
protein of unknown functionSAMN05518853_101334Not AvailableNegative385462 - 38609722688.6
trna s(2)c-32 sulfurtransferaseSAMN05518853_101335Not AvailableNegative386145 - 38707734718.0
predicted arabinose efflux permease, mfs familySAMN05518853_101336Not AvailablePositive387332 - 38855541126.3
dihydroneopterin aldolaseSAMN05518853_101337Not AvailableNegative388564 - 38899815684.0
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN05518853_101338Not AvailableNegative389007 - 38978327255.6
sam-dependent methyltransferase, mida familySAMN05518853_101339Not AvailablePositive389818 - 39093340358.9

Displaying genes 351 – 360 of 8094 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.