Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinate dehydrogenase (quinone) | SAMN05518853_101320 | Not Available | Negative | 366808 - 369288 | 87538.8 |
| membrane glycosyltransferase | SAMN05518853_101321 | Not Available | Negative | 369517 - 371532 | 73480.6 |
| two component, sigma54 specific, transcriptional regulator, fis family | SAMN05518853_101322 | Not Available | Negative | 371935 - 373323 | 50281.5 |
| hypothetical protein | SAMN05518853_101323 | Not Available | Negative | 373395 - 374051 | 23331.2 |
| two-component system, ntrc family, sensor histidine kinase glrk | SAMN05518853_101324 | Not Available | Negative | 374109 - 375536 | 52285.2 |
| pp_00321 | SAMN05518853_101325 | Not Available | Negative | 375536 - 376897 | Not Available |
| hypothetical protein | SAMN05518853_101326 | Not Available | Negative | 376960 - 377418 | 16530.0 |
| rnd family efflux transporter, mfp subunit | SAMN05518853_101327 | Not Available | Positive | 377605 - 378918 | 44524.0 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN05518853_101328 | Not Available | Positive | 378915 - 382100 | 113799.0 |
| hypothetical protein | SAMN05518853_101329 | Not Available | Negative | 382178 - 382453 | 9560.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
