Variovorax sp. OK202

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. OK202 is a rod-shaped bacterium characterized by possessing a single replicon. This trait is significant as it indicates a streamlined genomic organization, which can influence its replication and metabolic efficiency. The organism is cataloged in the sequence database with the accession number FNZJ00000000.1, allowing for further study and reference within scientific literature. Variovorax species are generally known for their versatility in various environments, often exhibiting capabilities such as biodegradation and bioremediation. While specific ecological roles of Variovorax sp. OK202 are not detailed here, the genus is often associated with the degradation of pollutants, which suggests that this strain could potentially play a role in bioremediation processes. The unique characteristics of Variovorax sp. OK202, including its rod shape and genomic structure, may confer advantages in adapting to diverse ecological niches. Understanding the traits of this bacterium can provide insights into its potential applications in environmental microbiology, particularly in the context of pollutant degradation and ecosystem management. Further research could elucidate its specific metabolic pathways and interactions within its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. OK202
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. OK202 genome assembly, contig: Ga0115515_170, whole

Gene Summary

Adenine Count

1408811 bp

Thymine Count

1405773 bp

Guanine Count

2995055 bp

Cytosine Count

2992361 bp

Genome Length

8802000 bp

Protein-coding Genes

8015 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
quinate dehydrogenase (quinone)SAMN05518853_101320Not AvailableNegative366808 - 36928887538.8
membrane glycosyltransferaseSAMN05518853_101321Not AvailableNegative369517 - 37153273480.6
two component, sigma54 specific, transcriptional regulator, fis familySAMN05518853_101322Not AvailableNegative371935 - 37332350281.5
hypothetical proteinSAMN05518853_101323Not AvailableNegative373395 - 37405123331.2
two-component system, ntrc family, sensor histidine kinase glrkSAMN05518853_101324Not AvailableNegative374109 - 37553652285.2
pp_00321SAMN05518853_101325Not AvailableNegative375536 - 376897Not Available
hypothetical proteinSAMN05518853_101326Not AvailableNegative376960 - 37741816530.0
rnd family efflux transporter, mfp subunitSAMN05518853_101327Not AvailablePositive377605 - 37891844524.0
hydrophobic/amphiphilic exporter-1, hae1 familySAMN05518853_101328Not AvailablePositive378915 - 382100113799.0
hypothetical proteinSAMN05518853_101329Not AvailableNegative382178 - 3824539560.21

Displaying genes 341 – 350 of 8094 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.