Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-sigma-k factor rska | SAMN05518853_101250 | Not Available | Positive | 287061 - 287813 | 26944.4 |
| 2-hydroxychromene-2-carboxylate isomerase | SAMN05518853_101251 | Not Available | Positive | 288006 - 288632 | 23209.7 |
| heat repeat | SAMN05518853_101252 | Not Available | Negative | 288629 - 290026 | 51119.7 |
| diaminopimelate epimerase | SAMN05518853_101253 | Not Available | Positive | 290082 - 290975 | 31881.2 |
| hypothetical protein | SAMN05518853_101254 | Not Available | Positive | 290972 - 291673 | 25921.8 |
| uncharacterized sam-binding protein ycdf, duf218 family | SAMN05518853_101255 | Not Available | Positive | 291670 - 292305 | 22728.8 |
| integrase/recombinase xerc | SAMN05518853_101256 | Not Available | Positive | 292280 - 293329 | 38081.7 |
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN05518853_101257 | Not Available | Positive | 293379 - 294566 | 42659.8 |
| gtpase, g3e family | SAMN05518853_101258 | Not Available | Positive | 294763 - 295827 | 39713.3 |
| uncharacterized conserved protein ydga, duf945 family | SAMN05518853_101259 | Not Available | Negative | 295903 - 297417 | 52905.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
