Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05518853_101240 | Not Available | Positive | 276272 - 276607 | 11624.7 |
| lysr family transcriptional regulator, glycine cleavage system transcriptional activator | SAMN05518853_101241 | Not Available | Negative | 276648 - 277598 | 34634.2 |
| predicted arabinose efflux permease, mfs family | SAMN05518853_101242 | Not Available | Positive | 277734 - 279212 | 50717.8 |
| hypothetical protein | SAMN05518853_101243 | Not Available | Negative | 279393 - 279803 | 14809.1 |
| hypothetical protein | SAMN05518853_101244 | Not Available | Negative | 279800 - 280330 | 19364.2 |
| lysine-specific metallo-endopeptidase | SAMN05518853_101245 | Not Available | Negative | 280320 - 281321 | 36548.6 |
| acetamidase/formamidase | SAMN05518853_101246 | Not Available | Negative | 281606 - 283078 | 52874.6 |
| transcriptional regulator, arac family | SAMN05518853_101247 | Not Available | Positive | 283246 - 285717 | 89096.6 |
| protein of unknown function | SAMN05518853_101248 | Not Available | Positive | 285850 - 286425 | 19875.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05518853_101249 | Not Available | Positive | 286501 - 287064 | 20705.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
