Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytosine deaminase | SAMN05518853_101220 | Not Available | Positive | 257989 - 259239 | 44324.5 |
| mfs transporter, cp family, cyanate transporter | SAMN05518853_101221 | Not Available | Positive | 259290 - 260537 | 43069.7 |
| trna(arg) a34 adenosine deaminase tada | SAMN05518853_101222 | Not Available | Positive | 260542 - 261036 | 17411.8 |
| hypothetical protein | SAMN05518853_101223 | Not Available | Negative | 261073 - 262281 | 42809.0 |
| dienelactone hydrolase | SAMN05518853_101224 | Not Available | Positive | 263099 - 264346 | 44747.3 |
| hypothetical protein | SAMN05518853_101225 | Not Available | Positive | 264492 - 264749 | 8604.24 |
| 4-oxalocrotonate tautomerase | SAMN05518853_101226 | Not Available | Negative | 264815 - 265042 | 8195.71 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05518853_101227 | Not Available | Negative | 265107 - 265862 | 25593.6 |
| transcriptional regulator, lysr family | SAMN05518853_101228 | Not Available | Negative | 266020 - 267003 | 35228.7 |
| predicted arabinose efflux permease, mfs family | SAMN05518853_101229 | Not Available | Positive | 267114 - 268382 | 43150.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
