Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, dha1 family, bicyclomycin/chloramphenicol resistance protein | SAMN05518853_101210 | Not Available | Positive | 247965 - 249188 | 41987.3 |
| hypothetical protein | SAMN05518853_101211 | Not Available | Negative | 249228 - 249782 | 19839.0 |
| 23s rrna pseudouridine2604 synthase | SAMN05518853_101212 | Not Available | Negative | 249904 - 250632 | 26652.4 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05518853_101213 | Not Available | Negative | 250632 - 252305 | 59879.3 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05518853_101214 | Not Available | Positive | 252445 - 253470 | 36216.5 |
| conserved hypothetical protein | SAMN05518853_101215 | Not Available | Negative | 253471 - 254301 | 29524.8 |
| threonine/homoserine efflux transporter rhta | SAMN05518853_101216 | Not Available | Negative | 254352 - 255299 | 32825.7 |
| dna-binding transcriptional regulator, gntr family | SAMN05518853_101217 | Not Available | Negative | 255363 - 256130 | 27611.9 |
| protein of unknown function | SAMN05518853_101218 | Not Available | Positive | 256302 - 256517 | 7542.27 |
| solute:na+ symporter, sss family | SAMN05518853_101219 | Not Available | Positive | 256514 - 257989 | 52199.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
