Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxychromene-2-carboxylate isomerase | SAMN05518853_101139 | Not Available | Positive | 175612 - 176205 | 21356.6 |
| enoyl-coa hydratase/carnithine racemase | SAMN05518853_101140 | Not Available | Positive | 176240 - 177004 | 27045.0 |
| branched-chain amino acid transport system substrate-binding protein | SAMN05518853_101141 | Not Available | Positive | 177189 - 178319 | 40721.5 |
| acyl-coa thioesterase ycia | SAMN05518853_101142 | Not Available | Negative | 178364 - 178804 | 15845.1 |
| atp-binding cassette, subfamily b | SAMN05518853_101143 | Not Available | Positive | 178846 - 180699 | 68412.0 |
| lactate dehydrogenase | SAMN05518853_101144 | Not Available | Positive | 180743 - 181681 | 33023.9 |
| amidase | SAMN05518853_101145 | Not Available | Negative | 181804 - 183249 | 51856.8 |
| transcriptional regulator, lysr family | SAMN05518853_101146 | Not Available | Positive | 183319 - 184311 | 36265.6 |
| aspartate ammonia-lyase | SAMN05518853_101147 | Not Available | Positive | 184488 - 185954 | 52038.0 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05518853_101148 | Not Available | Positive | 186123 - 187022 | 32127.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
