Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN05518853_101129 | Not Available | Negative | 164645 - 165532 | 32041.8 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05518853_101130 | Not Available | Positive | 165676 - 166434 | 26423.7 |
| transcriptional regulator, tetr family | SAMN05518853_101131 | Not Available | Positive | 166589 - 167278 | 24633.7 |
| hypothetical protein | SAMN05518853_101132 | Not Available | Positive | 167373 - 169169 | 64921.2 |
| uncharacterized conserved protein, duf2147 family | SAMN05518853_101133 | Not Available | Positive | 169225 - 169659 | 15625.7 |
| 3-hydroxyacyl-coa dehydrogenase | SAMN05518853_101134 | Not Available | Positive | 169781 - 172216 | 86768.8 |
| very-short-patch-repair endonuclease | SAMN05518853_101135 | Not Available | Positive | 172231 - 172716 | 18508.8 |
| acetyl-coa acyltransferase | SAMN05518853_101136 | Not Available | Positive | 172713 - 173909 | 41665.2 |
| acyl-coa thioesterase | SAMN05518853_101137 | Not Available | Positive | 173998 - 174831 | 30125.6 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05518853_101138 | Not Available | Positive | 174837 - 175583 | 27000.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
