Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. OK202 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1408811 bp
Thymine Count
1405773 bp
Guanine Count
2995055 bp
Cytosine Count
2992361 bp
Genome Length
8802000 bp
Protein-coding Genes
8015 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sis domain-containing protein | SAMN05518853_10189 | Not Available | Positive | 120834 - 121247 | 14665.7 |
| nad dependent epimerase/dehydratase family protein | SAMN05518853_10190 | Not Available | Positive | 121661 - 122287 | 23213.8 |
| d,d-heptose 1,7-bisphosphate phosphatase | SAMN05518853_10191 | Not Available | Positive | 122284 - 124194 | 69953.7 |
| d-glycero-alpha-d-manno-heptose-7-phosphate kinase | SAMN05518853_10192 | Not Available | Positive | 124191 - 125180 | 35969.2 |
| hypothetical protein | SAMN05518853_10193 | Not Available | Positive | 125517 - 127145 | 62561.9 |
| methyltransferase domain-containing protein | SAMN05518853_10194 | Not Available | Positive | 127142 - 129142 | 74968.6 |
| hypothetical protein | SAMN05518853_10195 | Not Available | Positive | 129663 - 130115 | 16837.7 |
| hypothetical protein | SAMN05518853_10196 | Not Available | Positive | 130447 - 131799 | 48858.5 |
| glycosyl transferases group 1 | SAMN05518853_10197 | Not Available | Positive | 131799 - 132968 | 43621.9 |
| lipopolysaccharide transport system atp-binding protein | SAMN05518853_10198 | Not Available | Negative | 132980 - 133681 | 24931.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
