Variovorax sp. OK202

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. OK202 is a rod-shaped bacterium characterized by possessing a single replicon. This trait is significant as it indicates a streamlined genomic organization, which can influence its replication and metabolic efficiency. The organism is cataloged in the sequence database with the accession number FNZJ00000000.1, allowing for further study and reference within scientific literature. Variovorax species are generally known for their versatility in various environments, often exhibiting capabilities such as biodegradation and bioremediation. While specific ecological roles of Variovorax sp. OK202 are not detailed here, the genus is often associated with the degradation of pollutants, which suggests that this strain could potentially play a role in bioremediation processes. The unique characteristics of Variovorax sp. OK202, including its rod shape and genomic structure, may confer advantages in adapting to diverse ecological niches. Understanding the traits of this bacterium can provide insights into its potential applications in environmental microbiology, particularly in the context of pollutant degradation and ecosystem management. Further research could elucidate its specific metabolic pathways and interactions within its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. OK202
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. OK202 genome assembly, contig: Ga0115515_170, whole

Gene Summary

Adenine Count

1408811 bp

Thymine Count

1405773 bp

Guanine Count

2995055 bp

Cytosine Count

2992361 bp

Genome Length

8802000 bp

Protein-coding Genes

8015 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sis domain-containing proteinSAMN05518853_10189Not AvailablePositive120834 - 12124714665.7
nad dependent epimerase/dehydratase family proteinSAMN05518853_10190Not AvailablePositive121661 - 12228723213.8
d,d-heptose 1,7-bisphosphate phosphataseSAMN05518853_10191Not AvailablePositive122284 - 12419469953.7
d-glycero-alpha-d-manno-heptose-7-phosphate kinaseSAMN05518853_10192Not AvailablePositive124191 - 12518035969.2
hypothetical proteinSAMN05518853_10193Not AvailablePositive125517 - 12714562561.9
methyltransferase domain-containing proteinSAMN05518853_10194Not AvailablePositive127142 - 12914274968.6
hypothetical proteinSAMN05518853_10195Not AvailablePositive129663 - 13011516837.7
hypothetical proteinSAMN05518853_10196Not AvailablePositive130447 - 13179948858.5
glycosyl transferases group 1SAMN05518853_10197Not AvailablePositive131799 - 13296843621.9
lipopolysaccharide transport system atp-binding proteinSAMN05518853_10198Not AvailableNegative132980 - 13368124931.4

Displaying genes 111 – 120 of 8094 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.