Variovorax sp. OK202

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. OK202 is a rod-shaped bacterium characterized by possessing a single replicon. This trait is significant as it indicates a streamlined genomic organization, which can influence its replication and metabolic efficiency. The organism is cataloged in the sequence database with the accession number FNZJ00000000.1, allowing for further study and reference within scientific literature. Variovorax species are generally known for their versatility in various environments, often exhibiting capabilities such as biodegradation and bioremediation. While specific ecological roles of Variovorax sp. OK202 are not detailed here, the genus is often associated with the degradation of pollutants, which suggests that this strain could potentially play a role in bioremediation processes. The unique characteristics of Variovorax sp. OK202, including its rod shape and genomic structure, may confer advantages in adapting to diverse ecological niches. Understanding the traits of this bacterium can provide insights into its potential applications in environmental microbiology, particularly in the context of pollutant degradation and ecosystem management. Further research could elucidate its specific metabolic pathways and interactions within its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. OK202
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. OK202 genome assembly, contig: Ga0115515_170, whole

Gene Summary

Adenine Count

1408811 bp

Thymine Count

1405773 bp

Guanine Count

2995055 bp

Cytosine Count

2992361 bp

Genome Length

8802000 bp

Protein-coding Genes

8015 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-binding transcriptional regulator, marr familySAMN05518853_101972Not AvailableNegative1070067 - 107055218290.9
indolepyruvate ferredoxin oxidoreductase alpha subunitSAMN05518853_101973Not AvailablePositive1070697 - 107288978498.4
indolepyruvate ferredoxin oxidoreductase beta subunitSAMN05518853_101974Not AvailablePositive1072894 - 107439654389.5
vanillate o-demethylase ferredoxin subunitSAMN05518853_101975Not AvailablePositive1074410 - 107540235847.1
phenylpropionate dioxygenase, large terminal subunitSAMN05518853_101976Not AvailablePositive1075422 - 107673549534.6
3-phenylpropionate/cinnamic acid dioxygenase, small subunitSAMN05518853_101977Not AvailablePositive1076735 - 107724719781.3
acyl-coa synthetase (amp-forming)/amp-acid ligase iiSAMN05518853_101978Not AvailablePositive1077255 - 107890158685.8
acetyl-coa acetyltransferaseSAMN05518853_101979Not AvailablePositive1078898 - 108007041844.8
hypothetical proteinSAMN05518853_101980Not AvailablePositive1080067 - 10801593217.93
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN05518853_101981Not AvailablePositive1080156 - 108140945180.4

Displaying genes 991 – 1000 of 8094 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.