Pseudomonas linyingensis strain LMG 25967

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas linyingensis strain LMG 25967 is characterized by having a single replicon, which indicates a streamlined genomic structure. This trait is significant as it can suggest efficiency in genetic replication and stability within its environment. The strain is cataloged under the accession number FNZE00000000.1, which provides a unique identifier for its genetic sequence in various databases, facilitating further research and studies related to its properties. As a member of the Pseudomonas genus, this strain likely possesses the metabolic versatility typical of its relatives, enabling it to thrive in diverse environments. Pseudomonas species are often associated with soil and water ecosystems, where they play critical roles in nutrient cycling and the degradation of organic materials. The ecological implications of Pseudomonas linyingensis strain LMG 25967 may include contributions to bioremediation processes, as many Pseudomonas strains are known for their ability to break down pollutants. Understanding the genetic and phenotypic characteristics of Pseudomonas linyingensis strain LMG 25967 can provide insights into its ecological roles and potential applications in environmental microbiology. The streamlined genomic structure, combined with its classification within a versatile genus, positions this strain as a candidate for further study in biotechnological applications, particularly in the context of ecosystem health and sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas linyingensis
Strainstrain LMG 25967

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas linyingensis strain LMG 25967
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas linyingensis strain LMG 25967 genome assembly, contig:

Gene Summary

Adenine Count

781880 bp

Thymine Count

804032 bp

Guanine Count

1588382 bp

Cytosine Count

1543754 bp

Genome Length

4721122 bp

Protein-coding Genes

4266 genes

Non-Coding Genes

141 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
anthranilate 1,2-dioxygenaseSAMN05216201_11935Not AvailableNegative4090474 - 409142135059.0
nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) familySAMN05216201_11936Not AvailableNegative4091453 - 409198918529.8
hypothetical proteinSAMN05216201_11937Not AvailableNegative4092007 - 409324545639.8
hypothetical proteinSAMN05216201_11938Not AvailableNegative4093334 - 409411927063.0
carboxymethylenebutenolidaseSAMN05216201_11939Not AvailableNegative4094130 - 409537445390.4
helix-turn-helix domain-containing proteinSAMN05216201_11940Not AvailablePositive4095797 - 409682538723.4
arac-type dna-binding proteinSAMN05216201_11941Not AvailableNegative4097299 - 409830638747.3
anthranilate 1,2-dioxygenaseSAMN05216201_11942Not AvailablePositive4098762 - 410015352353.6
anthranilate 1,2-dioxygenaseSAMN05216201_11943Not AvailablePositive4100153 - 410064419189.7
anthranilate 1,2-dioxygenase reductase subunitSAMN05216201_11944Not AvailablePositive4100664 - 410168937988.9

Displaying genes 3801 – 3810 of 4407 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.