Pseudomonas linyingensis strain LMG 25967

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas linyingensis strain LMG 25967 is characterized by having a single replicon, which indicates a streamlined genomic structure. This trait is significant as it can suggest efficiency in genetic replication and stability within its environment. The strain is cataloged under the accession number FNZE00000000.1, which provides a unique identifier for its genetic sequence in various databases, facilitating further research and studies related to its properties. As a member of the Pseudomonas genus, this strain likely possesses the metabolic versatility typical of its relatives, enabling it to thrive in diverse environments. Pseudomonas species are often associated with soil and water ecosystems, where they play critical roles in nutrient cycling and the degradation of organic materials. The ecological implications of Pseudomonas linyingensis strain LMG 25967 may include contributions to bioremediation processes, as many Pseudomonas strains are known for their ability to break down pollutants. Understanding the genetic and phenotypic characteristics of Pseudomonas linyingensis strain LMG 25967 can provide insights into its ecological roles and potential applications in environmental microbiology. The streamlined genomic structure, combined with its classification within a versatile genus, positions this strain as a candidate for further study in biotechnological applications, particularly in the context of ecosystem health and sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas linyingensis
Strainstrain LMG 25967

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas linyingensis strain LMG 25967
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas linyingensis strain LMG 25967 genome assembly, contig:

Gene Summary

Adenine Count

781880 bp

Thymine Count

804032 bp

Guanine Count

1588382 bp

Cytosine Count

1543754 bp

Genome Length

4721122 bp

Protein-coding Genes

4266 genes

Non-Coding Genes

141 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent dna helicase recgSAMN05216201_11639Not AvailablePositive3792669 - 379474775984.3
nosr/niri family transcriptional regulator, nitrous oxide reductase regulatorSAMN05216201_11640Not AvailableNegative3794819 - 379694880039.8
monoamine oxidaseSAMN05216201_11641Not AvailableNegative3797682 - 379874338806.4
alkylhydroperoxidase ahpd family core domain-containing proteinSAMN05216201_11642Not AvailableNegative3798798 - 379913311784.1
nadp-dependent 3-hydroxy acid dehydrogenase ydfgSAMN05216201_11643Not AvailableNegative3799148 - 379992126544.8
lysr family transcriptional regulator, glycine cleavage system transcriptional activatorSAMN05216201_11644Not AvailablePositive3800099 - 380103133597.4
anti-sigma factor chrr, cupin superfamilySAMN05216201_11645Not AvailableNegative3801020 - 380166123175.7
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN05216201_11646Not AvailableNegative3801658 - 380240125861.0
threonine/homoserine efflux transporter rhtaSAMN05216201_11647Not AvailablePositive3802725 - 380370533808.1
hypothetical proteinSAMN05216201_11648Not AvailableNegative3803922 - 380430214132.3

Displaying genes 3511 – 3520 of 4407 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.