Pseudomonas linyingensis strain LMG 25967

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas linyingensis strain LMG 25967 is characterized by having a single replicon, which indicates a streamlined genomic structure. This trait is significant as it can suggest efficiency in genetic replication and stability within its environment. The strain is cataloged under the accession number FNZE00000000.1, which provides a unique identifier for its genetic sequence in various databases, facilitating further research and studies related to its properties. As a member of the Pseudomonas genus, this strain likely possesses the metabolic versatility typical of its relatives, enabling it to thrive in diverse environments. Pseudomonas species are often associated with soil and water ecosystems, where they play critical roles in nutrient cycling and the degradation of organic materials. The ecological implications of Pseudomonas linyingensis strain LMG 25967 may include contributions to bioremediation processes, as many Pseudomonas strains are known for their ability to break down pollutants. Understanding the genetic and phenotypic characteristics of Pseudomonas linyingensis strain LMG 25967 can provide insights into its ecological roles and potential applications in environmental microbiology. The streamlined genomic structure, combined with its classification within a versatile genus, positions this strain as a candidate for further study in biotechnological applications, particularly in the context of ecosystem health and sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas linyingensis
Strainstrain LMG 25967

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas linyingensis strain LMG 25967
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas linyingensis strain LMG 25967 genome assembly, contig:

Gene Summary

Adenine Count

781880 bp

Thymine Count

804032 bp

Guanine Count

1588382 bp

Cytosine Count

1543754 bp

Genome Length

4721122 bp

Protein-coding Genes

4266 genes

Non-Coding Genes

141 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane protein tolcSAMN05216201_103122Not AvailablePositive1030323 - 103236575791.1
hlyd family secretion proteinSAMN05216201_103123Not AvailablePositive1032375 - 103339738391.7
Trna-asnNot AvailableNot AvailablePositive1033473 - 1033548Not Available
aromatic-amino-acid transaminaseSAMN05216201_103125Not AvailableNegative1033618 - 103481443143.5
excinuclease abc subunit bSAMN05216201_103126Not AvailablePositive1035039 - 103705476282.1
benzoate membrane transport proteinSAMN05216201_103127Not AvailableNegative1037058 - 103822740205.1
cupin domain-containing proteinSAMN05216201_103128Not AvailablePositive1038334 - 103893321322.3
hypothetical proteinSAMN05216201_103129Not AvailablePositive1038964 - 103977028785.6
soluble lytic murein transglycosylaseSAMN05216201_103130Not AvailableNegative1039863 - 104179473709.2
atp-binding cassette, subfamily f, uupSAMN05216201_103131Not AvailablePositive1041993 - 104390370884.8

Displaying genes 1081 – 1090 of 4407 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.