Paracoccus alkenifer strain DSM 11593

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Paracoccus

Description

Paracoccus alkenifer strain DSM 11593 is a notable member of the Paracoccus genus, characterized by the presence of flagella, which suggests a motile lifestyle in its ecological niche. This trait likely facilitates its ability to navigate its environment and possibly enhances its capacity to colonize various substrates. The strain has been documented with a single replicon, indicating a streamlined genomic arrangement that can contribute to its metabolic efficiency and adaptability. The accession number for this strain is FNXG00000000.1, which provides a reference point for genetic and genomic studies, enabling researchers to access its complete genomic information for further analysis. Biologically, Paracoccus species are known for their versatility in metabolizing a variety of organic compounds, which can include alkanes and other hydrocarbons. This metabolic capability may play a significant role in bioremediation processes, allowing the organism to thrive in environments contaminated with petroleum or similar pollutants. The presence of flagella may also enhance its survival in fluctuating environmental conditions, allowing it to disperse effectively and exploit different ecological niches. Overall, the traits of Paracoccus alkenifer strain DSM 11593 underscore its potential utility in environmental microbiology, particularly in contexts that require the degradation of complex organic pollutants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParacoccus
SpeciesParacoccus alkenifer
Strainstrain DSM 11593

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paracoccus alkenifer strain DSM 11593 genome assembly, contig:

Gene Summary

Adenine Count

523041 bp

Thymine Count

520303 bp

Guanine Count

1067499 bp

Cytosine Count

1081057 bp

Genome Length

3191900 bp

Protein-coding Genes

2950 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iv secretory pathway, vird2 components (relaxase)SAMN04488075_2984Not AvailableNegative2959233 - 296098764095.8
transglycosylase slt domain-containing proteinSAMN04488075_2985Not AvailableNegative2961231 - 296199526852.3
uncharacterized conserved protein, duf736 familySAMN04488075_2986Not AvailableNegative2961998 - 296233312572.6
conjugative transfer signal peptidase trafSAMN04488075_2987Not AvailableNegative2962402 - 296294719754.9
protein of unknown functionSAMN04488075_2988Not AvailableNegative2962944 - 296342918396.8
plasmid segregation centromere-binding protein pargSAMN04488075_2989Not AvailableNegative2963426 - 29636809210.95
site-specific dna-methyltransferase (adenine-specific)SAMN04488075_2990Not AvailableNegative2963677 - 296442027352.4
plasmid segregation oscillating atpase parfSAMN04488075_2991Not AvailableNegative2964417 - 296507022847.7
plasmid replication initiator proteinSAMN04488075_2992Not AvailableNegative2965067 - 296624243698.9
helix-turn-helix domain-containing proteinSAMN04488075_2993Not AvailableNegative2966261 - 296654210248.2

Displaying genes 2831 – 2840 of 3056 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.