Paracoccus alkenifer strain DSM 11593

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Paracoccus

Description

Paracoccus alkenifer strain DSM 11593 is a notable member of the Paracoccus genus, characterized by the presence of flagella, which suggests a motile lifestyle in its ecological niche. This trait likely facilitates its ability to navigate its environment and possibly enhances its capacity to colonize various substrates. The strain has been documented with a single replicon, indicating a streamlined genomic arrangement that can contribute to its metabolic efficiency and adaptability. The accession number for this strain is FNXG00000000.1, which provides a reference point for genetic and genomic studies, enabling researchers to access its complete genomic information for further analysis. Biologically, Paracoccus species are known for their versatility in metabolizing a variety of organic compounds, which can include alkanes and other hydrocarbons. This metabolic capability may play a significant role in bioremediation processes, allowing the organism to thrive in environments contaminated with petroleum or similar pollutants. The presence of flagella may also enhance its survival in fluctuating environmental conditions, allowing it to disperse effectively and exploit different ecological niches. Overall, the traits of Paracoccus alkenifer strain DSM 11593 underscore its potential utility in environmental microbiology, particularly in contexts that require the degradation of complex organic pollutants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParacoccus
SpeciesParacoccus alkenifer
Strainstrain DSM 11593

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paracoccus alkenifer strain DSM 11593 genome assembly, contig:

Gene Summary

Adenine Count

523041 bp

Thymine Count

520303 bp

Guanine Count

1067499 bp

Cytosine Count

1081057 bp

Genome Length

3191900 bp

Protein-coding Genes

2950 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glyoxylase, beta-lactamase superfamily iiSAMN04488075_2480Not AvailablePositive2448003 - 244896534828.7
peptide/nickel transport system substrate-binding proteinSAMN04488075_2481Not AvailablePositive2449087 - 245066758657.8
peptide/nickel transport system permease proteinSAMN04488075_2482Not AvailablePositive2450831 - 245180836375.0
peptide/nickel transport system permease proteinSAMN04488075_2483Not AvailablePositive2451810 - 245277834663.7
peptide/nickel transport system atp-binding proteinSAMN04488075_2484Not AvailablePositive2452775 - 245441258971.6
malonyl-coa/methylmalonyl-coa synthetaseSAMN04488075_2485Not AvailableNegative2454443 - 245595453916.5
malonyl-coa decarboxylaseSAMN04488075_2486Not AvailableNegative2455951 - 245726747972.2
trap transporter, dctm subunitSAMN04488075_2487Not AvailableNegative2457270 - 245859246945.9
trap-type c4-dicarboxylate transport system, small permease componentSAMN04488075_2488Not AvailableNegative2458592 - 245914020132.3
trap-type c4-dicarboxylate transport system, substrate-binding proteinSAMN04488075_2489Not AvailableNegative2459198 - 246018435904.3

Displaying genes 2401 – 2410 of 3056 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.