Paracoccus alkenifer strain DSM 11593

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Paracoccus

Description

Paracoccus alkenifer strain DSM 11593 is a notable member of the Paracoccus genus, characterized by the presence of flagella, which suggests a motile lifestyle in its ecological niche. This trait likely facilitates its ability to navigate its environment and possibly enhances its capacity to colonize various substrates. The strain has been documented with a single replicon, indicating a streamlined genomic arrangement that can contribute to its metabolic efficiency and adaptability. The accession number for this strain is FNXG00000000.1, which provides a reference point for genetic and genomic studies, enabling researchers to access its complete genomic information for further analysis. Biologically, Paracoccus species are known for their versatility in metabolizing a variety of organic compounds, which can include alkanes and other hydrocarbons. This metabolic capability may play a significant role in bioremediation processes, allowing the organism to thrive in environments contaminated with petroleum or similar pollutants. The presence of flagella may also enhance its survival in fluctuating environmental conditions, allowing it to disperse effectively and exploit different ecological niches. Overall, the traits of Paracoccus alkenifer strain DSM 11593 underscore its potential utility in environmental microbiology, particularly in contexts that require the degradation of complex organic pollutants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParacoccus
SpeciesParacoccus alkenifer
Strainstrain DSM 11593

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paracoccus alkenifer strain DSM 11593 genome assembly, contig:

Gene Summary

Adenine Count

523041 bp

Thymine Count

520303 bp

Guanine Count

1067499 bp

Cytosine Count

1081057 bp

Genome Length

3191900 bp

Protein-coding Genes

2950 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tigr00659 family proteinSAMN04488075_2388Not AvailableNegative2343149 - 234386824336.4
putative effector of murein hydrolase lrga, upf0299 familySAMN04488075_2389Not AvailableNegative2343865 - 234422112183.4
chromosome segregation proteinSAMN04488075_2390Not AvailablePositive2344405 - 2347851121645.0
enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 familySAMN04488075_2391Not AvailablePositive2347976 - 234843115391.5
glycerophosphoryl diester phosphodiesteraseSAMN04488075_2392Not AvailablePositive2348571 - 234932626073.6
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN04488075_2393Not AvailablePositive2349314 - 235003924410.4
pts system, nitrogen regulatory iia componentSAMN04488075_2394Not AvailableNegative2350053 - 235051716323.7
ribosomal subunit interface proteinSAMN04488075_2395Not AvailableNegative2350604 - 235118521814.7
lipopolysaccharide export system atp-binding proteinSAMN04488075_2396Not AvailableNegative2351393 - 235221729599.7
lipopolysaccharide export system protein lptaSAMN04488075_2397Not AvailableNegative2352217 - 235270216137.2

Displaying genes 2311 – 2320 of 3056 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.