Paracoccus alkenifer strain DSM 11593

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Paracoccus

Description

Paracoccus alkenifer strain DSM 11593 is a notable member of the Paracoccus genus, characterized by the presence of flagella, which suggests a motile lifestyle in its ecological niche. This trait likely facilitates its ability to navigate its environment and possibly enhances its capacity to colonize various substrates. The strain has been documented with a single replicon, indicating a streamlined genomic arrangement that can contribute to its metabolic efficiency and adaptability. The accession number for this strain is FNXG00000000.1, which provides a reference point for genetic and genomic studies, enabling researchers to access its complete genomic information for further analysis. Biologically, Paracoccus species are known for their versatility in metabolizing a variety of organic compounds, which can include alkanes and other hydrocarbons. This metabolic capability may play a significant role in bioremediation processes, allowing the organism to thrive in environments contaminated with petroleum or similar pollutants. The presence of flagella may also enhance its survival in fluctuating environmental conditions, allowing it to disperse effectively and exploit different ecological niches. Overall, the traits of Paracoccus alkenifer strain DSM 11593 underscore its potential utility in environmental microbiology, particularly in contexts that require the degradation of complex organic pollutants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParacoccus
SpeciesParacoccus alkenifer
Strainstrain DSM 11593

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paracoccus alkenifer strain DSM 11593 genome assembly, contig:

Gene Summary

Adenine Count

523041 bp

Thymine Count

520303 bp

Guanine Count

1067499 bp

Cytosine Count

1081057 bp

Genome Length

3191900 bp

Protein-coding Genes

2950 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
serine protease sohbSAMN04488075_1896Not AvailablePositive1830592 - 183143430092.5
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN04488075_1897Not AvailablePositive1831539 - 183231827590.2
excinuclease abc subunit cSAMN04488075_1898Not AvailablePositive1832618 - 183450168959.9
uncharacterized conserved proteinSAMN04488075_1899Not AvailableNegative1834530 - 183613756290.7
nh(3)-dependent nad(+) synthetaseSAMN04488075_1900Not AvailablePositive1836376 - 183801058772.9
nicotinate phosphoribosyltransferaseSAMN04488075_1901Not AvailableNegative1838032 - 183933950146.3
nicotinamidase/pyrazinamidaseSAMN04488075_1902Not AvailableNegative1839336 - 183992621044.1
upf0176 proteinSAMN04488075_1903Not AvailablePositive1840043 - 184094232860.1
malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+)SAMN04488075_1904Not AvailableNegative1841082 - 184336481322.2
dna mismatch repair protein mutsSAMN04488075_1905Not AvailablePositive1843551 - 184617893731.5

Displaying genes 1821 – 1830 of 3056 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.