Rheinheimera pacifica strain DSM 17616

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Chromatiaceae

Genus

Rheinheimera

Description

Rheinheimera pacifica strain DSM 17616 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is notable for possessing a single replicon, which is significant for its genetic stability and replication processes. The genome of Rheinheimera pacifica strain DSM 17616 is accessible under the accession number FNXF00000000.1, allowing for further genomic studies and insights into its metabolic capabilities. As an aerobic organism, Rheinheimera pacifica strain DSM 17616 requires oxygen for its growth and metabolic processes, positioning it within environments where oxygen is readily available. This trait suggests that it may thrive in oxygen-rich aquatic ecosystems, aligning with its classification within the Rheinheimera genus, which includes bacteria commonly found in marine environments. The ecological role of Rheinheimera pacifica strain DSM 17616 could be linked to its potential involvement in nutrient cycling within its habitat. Given its aerobic nature, it may play a part in the degradation of organic matter, contributing to the overall health and balance of marine ecosystems. Understanding the traits and ecological functions of this strain can provide insights into the dynamics of microbial communities, particularly in marine environments where such bacteria may influence nutrient availability and ecosystem stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyChromatiaceae
GenusRheinheimera
SpeciesRheinheimera pacifica
Strainstrain DSM 17616

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Rheinheimera pacifica strain DSM 17616
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rheinheimera pacifica strain DSM 17616 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna pseudouridine32 synthase / 23s rrna pseudouridine746 synthaseSAMN05660691_00921Not AvailableNegative1017872 - 101854625077.5
trna pseudouridine32 synthase / 23s rrna pseudouridine746 synthaseSAMN05660691_00922Not AvailablePositive1018651 - 101934025397.8
dipeptidyl aminopeptidase/acylaminoacyl peptidaseSAMN05660691_00923Not AvailableNegative1019577 - 102204893000.1
fmn-dependent nadh-azoreductaseSAMN05660691_00924Not AvailableNegative1022233 - 102284121758.3
rna polymerase sigma-70 factor, ecf subfamilySAMN05660691_00925Not AvailablePositive1023023 - 102367625007.8
anti-ecfsigma factor, chrrSAMN05660691_00926Not AvailablePositive1023660 - 102434925075.2
cysteine sulfinate desulfinase/cysteine desulfuraseSAMN05660691_00927Not AvailableNegative1024401 - 102665380428.1
gntr family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabaSAMN05660691_00928Not AvailableNegative1026788 - 102750427175.4
disulfide bond formation protein dsbbSAMN05660691_00929Not AvailablePositive1027678 - 102821419811.7
2,4-dienoyl-coa reductaseSAMN05660691_00930Not AvailableNegative1028329 - 102938137586.6

Displaying genes 971 – 980 of 4169 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.